The category of alkaloids is very broad and contains many chemicals, and the only thing they really have in common is that they contain nitrogen, and tend to be basic. Pipermethystine is toxic and pretty different from piperine.
The structure of methysticin does have some similarities to piperine, like Shulgin notes in that article, although methysticin is not an alkaloid (there are no alkaloids in kava roots). Basically half of the molecules are similar to each other, but the other half is completely different. However, it actually is possible that kavalactones could have a similar potentiating effect to piperine, not necessarily because the molecules are partly similar, but because they are metabolized similarly. According to wikipedia:
"Piperine is being studied for its potential to affect bioavailability of other compounds in dietary supplements. One example investigated is the potential for piperine to enhance the bioavailability of curcumin. In laboratory studies, it inhibits human CYP3A4 and P-glycoprotein which are enzymes involved in the metabolism and transport of xenobiotics and metabolites. Other research indicates it inhibits the degradation of ABCA1, a key transporter protein involved in cholesterol efflux. In animal studies, piperine inhibited CYP450 enzymes involved in drug metabolism."
https://en.wikipedia.org/wiki/Piperine
It is known that kavalactones are metabolized by CYP450 enzymes, including CYP3A4.
And interestingly, there is also evidence that kava inhibits P-glycoprotein:
Drug Metabolism and Disposition November 2005, 33 (11) 1580-1583
P-glycoprotein is involved in removing "foreign substances" including drugs and other chemicals from human cells. If is inhibited, the substances stay in the cells longer, so are more effective.
So the answer to the question seems to be: it is actually plausible.